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Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

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Science  29 Aug 2014:
Vol. 345, Issue 6200, pp. 1074-1079
DOI: 10.1126/science.1253714

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vol. 345 no. 6200 1074-1079

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History: 
  • Received for publication March 21, 2014
  • Accepted for publication July 11, 2014

Author Information

  1. Miguel Carneiro1,*,
  2. Carl-Johan Rubin2,*,
  3. Federica Di Palma3,4,*,
  4. Frank W. Albert5,,
  5. Jessica Alföldi3,
  6. Alvaro Martinez Barrio2,
  7. Gerli Pielberg2,
  8. Nima Rafati2,
  9. Shumaila Sayyab6,
  10. Jason Turner-Maier3,
  11. Shady Younis2,7,
  12. Sandra Afonso1,
  13. Bronwen Aken8,9,
  14. Joel M. Alves1,10,
  15. Daniel Barrell8,9,
  16. Gerard Bolet11,
  17. Samuel Boucher12,
  18. Hernán A. Burbano5,,
  19. Rita Campos1,
  20. Jean L. Chang3,
  21. Veronique Duranthon13,
  22. Luca Fontanesi14,
  23. Hervé Garreau11,
  24. David Heiman3,
  25. Jeremy Johnson3,
  26. Rose G. Mage15,
  27. Ze Peng16,
  28. Guillaume Queney17,
  29. Claire Rogel-Gaillard18,
  30. Magali Ruffier8,9,
  31. Steve Searle8,
  32. Rafael Villafuerte19,
  33. Anqi Xiong20,
  34. Sarah Young3,
  35. Karin Forsberg-Nilsson20,
  36. Jeffrey M. Good5,21,
  37. Eric S. Lander3,
  38. Nuno Ferrand1,22,*,
  39. Kerstin Lindblad-Toh2,3,*,§,
  40. Leif Andersson2,6,23,*,§
  1. 1CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Campus Agrário de Vairão, Universidade do Porto, 4485-661, Vairão, Portugal.
  2. 2Science for Life Laboratory Uppsala, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
  3. 3Broad Institute of Harvard and Massachusetts Institute of Technology, 7 Cambridge Center, Cambridge, MA 02142, USA.
  4. 4Vertebrate and Health Genomics, The Genome Analysis Centre, Norwich, UK.
  5. 5Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.
  6. 6Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
  7. 7Department of Animal Production, Ain Shams University, Shoubra El-Kheima, Cairo, Egypt.
  8. 8Wellcome Trust Sanger Institute, Hinxton, UK.
  9. 9European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
  10. 10Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK.
  11. 11Institut National de la Recherche Agronomique (INRA), UMR1388 Génétique, Physiologie et Systèmes d’Elevage, F-31326 Castanet-Tolosan, France.
  12. 12Labovet Conseil, BP539, 85505 Les Herbiers Cedex, France.
  13. 13INRA, UMR1198 Biologie du Développement et Reproduction, F-78350 Jouy-en-Josas, France.
  14. 14Department of Agricultural and Food Sciences, Division of Animal Sciences, University of Bologna, 40127 Bologna, Italy.
  15. 15Laboratory of Immunology, National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health, Bethesda, MD 20892, USA.
  16. 16U.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA.
  17. 17ANTAGENE, Animal Genomics Laboratory, Lyon, France.
  18. 18INRA, UMR1313 Génétique Animale et Biologie Intégrative, F- 78350, Jouy-en-Josas, France.
  19. 19Instituto de Estudios Sociales Avanzados, (IESA-CSIC) Campo Santo de los Mártires 7, Córdoba, Spain.
  20. 20Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.
  21. 21Division of Biological Sciences, The University of Montana, Missoula, MT 59812, USA.
  22. 22Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre s⁄n. 4169-007 Porto, Portugal.
  23. 23Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX 77843-4458, USA.
  1. §Corresponding author. E-mail: kersli{at}broadinstitute.org (K.L.-T.); leif.andersson{at}imbim.uu.se (L.A.)
  1. * These authors contributed equally to this work.

  • Present address: Department of Human Genetics, University of California, Los Angeles, Gonda Center, 695 Charles E. Young Drive South, Los Angeles, CA 90095, USA.

  • Present address: Department of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.

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