Research Article

The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions

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Science  12 Oct 2007:
Vol. 318, Issue 5848, pp. 245-250
DOI: 10.1126/science.1143609

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vol. 318 no. 5848 245-250

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  1. Sabeeha S. Merchant1,*,
  2. Simon E. Prochnik2,*,
  3. Olivier Vallon3,
  4. Elizabeth H. Harris4,
  5. Steven J. Karpowicz1,
  6. George B. Witman5,
  7. Astrid Terry2,
  8. Asaf Salamov2,
  9. Lillian K. Fritz-Laylin6,
  10. Laurence Maréchal-Drouard7,
  11. Wallace F. Marshall8,
  12. Liang-Hu Qu9,
  13. David R. Nelson10,
  14. Anton A. Sanderfoot11,
  15. Martin H. Spalding12,
  16. Vladimir V. Kapitonov13,
  17. Qinghu Ren14,
  18. Patrick Ferris15,
  19. Erika Lindquist2,
  20. Harris Shapiro2,
  21. Susan M. Lucas2,
  22. Jane Grimwood16,
  23. Jeremy Schmutz16,
  24. Pierre Cardol3,17,
  25. Heriberto Cerutti18,
  26. Guillaume Chanfreau1,
  27. Chun-Long Chen9,
  28. Valérie Cognat7,
  29. Martin T. Croft19,
  30. Rachel Dent20,
  31. Susan Dutcher21,
  32. Emilio Fernández22,
  33. Hideya Fukuzawa23,
  34. David González-Ballester24,
  35. Diego González-Halphen25,
  36. Armin Hallmann26,
  37. Marc Hanikenne17,
  38. Michael Hippler27,
  39. William Inwood20,
  40. Kamel Jabbari28,
  41. Ming Kalanon29,
  42. Richard Kuras3,
  43. Paul A. Lefebvre11,
  44. Stéphane D. Lemaire30,
  45. Alexey V. Lobanov31,
  46. Martin Lohr32,
  47. Andrea Manuell33,
  48. Iris Meier34,
  49. Laurens Mets35,
  50. Maria Mittag36,
  51. Telsa Mittelmeier37,
  52. James V. Moroney38,
  53. Jeffrey Moseley24,
  54. Carolyn Napoli39,
  55. Aurora M. Nedelcu40,
  56. Krishna Niyogi20,
  57. Sergey V. Novoselov31,
  58. Ian T. Paulsen14,
  59. Greg Pazour41,
  60. Saul Purton42,
  61. Jean-Philippe Ral43,
  62. Diego Mauricio Riaño-Pachón44,
  63. Wayne Riekhof45,
  64. Linda Rymarquis46,
  65. Michael Schroda47,
  66. David Stern48,
  67. James Umen15,
  68. Robert Willows49,
  69. Nedra Wilson50,
  70. Sara Lana Zimmer48,
  71. Jens Allmer51,
  72. Janneke Balk19,
  73. Katerina Bisova52,
  74. Chong-Jian Chen9,
  75. Marek Elias53,
  76. Karla Gendler39,
  77. Charles Hauser54,
  78. Mary Rose Lamb55,
  79. Heidi Ledford20,
  80. Joanne C. Long1,
  81. Jun Minagawa56,
  82. M. Dudley Page1,
  83. Junmin Pan57,
  84. Wirulda Pootakham24,
  85. Sanja Roje58,
  86. Annkatrin Rose59,
  87. Eric Stahlberg34,
  88. Aimee M. Terauchi1,
  89. Pinfen Yang60,
  90. Steven Ball61,
  91. Chris Bowler28,62,
  92. Carol L. Dieckmann37,
  93. Vadim N. Gladyshev31,
  94. Pamela Green46,
  95. Richard Jorgensen39,
  96. Stephen Mayfield33,
  97. Bernd Mueller-Roeber44,
  98. Sathish Rajamani63,
  99. Richard T. Sayre34,
  100. Peter Brokstein2,
  101. Inna Dubchak2,
  102. David Goodstein2,
  103. Leila Hornick2,
  104. Y. Wayne Huang2,
  105. Jinal Jhaveri2,
  106. Yigong Luo2,
  107. Diego Martínez2,
  108. Wing Chi Abby Ngau2,
  109. Bobby Otillar2,
  110. Alexander Poliakov2,
  111. Aaron Porter2,
  112. Lukasz Szajkowski2,
  113. Gregory Werner2,
  114. Kemin Zhou2,
  115. Igor V. Grigoriev2,
  116. Daniel S. Rokhsar2,6,,
  117. Arthur R. Grossman24,
  1. 1 Department of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, CA 90095, USA.
  2. 2 U.S. Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, CA 94598, USA.
  3. 3 CNRS, Université Paris 6, Institut de Biologie Physico-Chimique, 75005 Paris, France.
  4. 4 Department of Biology, Duke University, Durham, NC 27708, USA.
  5. 5 Department of Cell Biology, University of Massachusetts Medical School, Worcester, MA 01655, USA.
  6. 6 Department of Molecular and Cell Biology, University of California at Berkeley, Berkeley, CA 94720, USA.
  7. 7 Institut de Biologie Moléculaire des Plantes, CNRS, 67084 Strasbourg Cedex, France.
  8. 8 Department of Biochemistry and Biophysics, University of California at San Francisco, San Francisco, CA 94143, USA.
  9. 9 Biotechnology Research Center, Zhongshan University, Guangzhou 510275, China.
  10. 10 Department of Molecular Sciences and Center of Excellence in Genomics and Bioinformatics, University of Tennessee, Memphis, TN 38163, USA.
  11. 11 Department of Plant Biology, University of Minnesota, St. Paul, MN 55108, USA.
  12. 12 Department of Genetics, Development, and Cell Biology, Iowa State University, Ames, IA 50011, USA.
  13. 13 Genetic Information Research Institute, Mountain View, CA 94043, USA.
  14. 14 The Institute for Genomic Research, Rockville, MD 20850, USA.
  15. 15 Plant Biology Laboratory, Salk Institute, La Jolla, CA 92037, USA.
  16. 16 Stanford Human Genome Center, Stanford University School of Medicine, Palo Alto, CA 94304, USA.
  17. 17 Plant Biology Institute, Department of Life Sciences, University of Liège, B-4000 Liège, Belgium.
  18. 18 University of Nebraska-Lincoln, School of Biological Sciences–Plant Science Initiative, Lincoln, NE 68588, USA.
  19. 19 Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.
  20. 20 Department of Plant and Microbial Biology, University of California at Berkeley, Berkeley, CA 94720, USA.
  21. 21 Department of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA.
  22. 22 Departamento de Bioquímica y Biología Molecular, Facultad de Ciencias, Universidad de Córdoba, Campus de Rabanales, 14071 Córdoba, Spain.
  23. 23 Graduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan.
  24. 24 Department of Plant Biology, Carnegie Institution, Stanford, CA 94306, USA.
  25. 25 Departamento de Genética Molecular, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, México 04510 DF, Mexico.
  26. 26 Department of Cellular and Developmental Biology of Plants, University of Bielefeld, D-33615 Bielefeld, Germany.
  27. 27 Department of Biology, Institute of Plant Biochemistry and Biotechnology, University of Münster, 48143 Münster, Germany.
  28. 28 CNRS UMR 8186, Département de Biologie, Ecole Normale Supérieure, 75230 Paris, France.
  29. 29 Plant Cell Biology Research Centre, The School of Botany, The University of Melbourne, Parkville, Melbourne, VIC 3010, Australia.
  30. 30 Institut de Biotechnologie des Plantes, UMR 8618, CNRS/Université Paris-Sud, Orsay, France.
  31. 31 Department of Biochemistry, N151 Beadle Center, University of Nebraska, Lincoln, NE 68588–0664, USA.
  32. 32 Institut für Allgemeine Botanik, Johannes Gutenberg-Universität, 55099 Mainz, Germany.
  33. 33 Department of Cell Biology and Skaggs Institute for Chemical Biology, Scripps Research Institute, La Jolla, CA 92037, USA.
  34. 34 PCMB and Plant Biotechnology Center, Ohio State University, Columbus, OH 43210, USA.
  35. 35 Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA.
  36. 36 Institut für Allgemeine Botanik und Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, 07743 Jena, Germany.
  37. 37 Department of Molecular and Cellular Biology, University of Arizona, Tucson, AZ 85721, USA.
  38. 38 Department of Biological Science, Louisiana State University, Baton Rouge, LA 70803, USA.
  39. 39 Department of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.
  40. 40 Department of Biology, University of New Brunswick, Fredericton, NB, Canada E3B 6E1.
  41. 41 Department of Physiology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
  42. 42 Department of Biology, University College London, London WC1E 6BT, UK.
  43. 43 Unité de Glycobiologie Structurale et Fonctionnelle, UMR8576 CNRS/USTL, IFR 118, Université des Sciences et Technologies de Lille, Cedex, France.
  44. 44 Universität Potsdam, Institut für Biochemie und Biologie, D-14476 Golm, Germany.
  45. 45 Department of Medicine, National Jewish Medical and Research Center, Denver, CO 80206, USA.
  46. 46 Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA.
  47. 47 Institute of Biology II/Plant Biochemistry, 79104 Freiburg, Germany.
  48. 48 Boyce Thompson Institute for Plant Research at Cornell University, Ithaca, NY 14853, USA.
  49. 49 Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney 2109, Australia.
  50. 50 Department of Anatomy and Cell Biology, Oklahoma State University, Center for Health Sciences, Tulsa, OK 74107, USA.
  51. 51 Izmir Ekonomi Universitesi, 35330 Balcova-Izmir Turkey.
  52. 52 Institute of Microbiology, Czech Academy of Sciences, Czech Republic.
  53. 53 Department of Plant Physiology, Faculty of Sciences, Charles University, 128 44 Prague 2, Czech Republic.
  54. 54 Bioinformatics Program, St. Edward's University, Austin, TX 78704, USA.
  55. 55 Department of Biology, University of Puget Sound, Tacoma, WA 98407, USA.
  56. 56 Institute of Low-Temperature Science, Hokkaido University, 060-0819, Japan.
  57. 57 Department of Biology, Tsinghua University, Beijing, China 100084.
  58. 58 Institute of Biological Chemistry, Washington State University, Pullman, WA99164, USA.
  59. 59 Appalachian State University, Boone, NC 28608, USA.
  60. 60 Department of Biology, Marquette University, Milwaukee, WI 53233, USA.
  61. 61 UMR8576 CNRS, Laboratory of Biological Chemistry, 59655 Villeneuve d'Ascq, France.
  62. 62 Cell Signaling Laboratory, Stazione Zoologica, I 80121 Naples, Italy.
  63. 63 Graduate Program in Biophysics, Ohio State University, Columbus, OH 43210, USA.
  1. To whom correspondence should be addressed. E-mail: dsrokhsar{at}lbl.gov (D.S.R.); arthurg{at}stanford.edu (A.R.G.)
  • * These authors contributed equally to this work.

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