Table 5

Summary of the gene predictions inDrosophila. Gene prediction programs were used in combination with searches of protein and EST databases.

ResultGenie + Genscan*Genie onlyGenscan onlyNo gene prediction§Total
EST + protein match6,040 288 239 49 6,616
EST match only 1,357143 107 34 1,641
Protein match only 2,541157 220 78 2,996
No match 1,980 307 00 2,348
Total 11,918 895 627 16113,601
  • * Genie and Genscan matches overlapped but were not necessarily identical.

  • Genie predictions in regions not predicted by Genscan.

  • Genscan predictions in regions not predicted by Genie; in the absence of database matches, >4000 Genscan predictions were not included in the annotated gene set.

  • § Gene structures defined based on database matches in the absence of gene predictions.