Table 1

Genome coverage in Syd. Six fully sequenced rice BACs (GenBank) were compared to sequences in Syd to determine coverage and analyze gaps. Sequences were aligned and gaps analyzed for length and number. Manual gap closure was performed on contigs covering two BACs, and the analysis was repeated.

BACLengthGapsGap lengthCoverage (%)
BAC1156,05414199298.7
BAC2183,173761799.7
BAC3170,777733399.8
BAC4156,0671174399.5
BAC5154,5551189699.4
BAC6157,998131,78998.8
Total978,624636370
Edited to close gaps:
BAC1156,0543110099.3
BAC2183,173355099.7