Table 2 Sequencing, assembly, and GenomeZipper statistics for wheat B genome chromosome arms.

Sequence indicates the total assembled sequence (>200 bp); number of contigs is after filtering of highly repetitive sequence assemblies; syntenic loci is the number of gene loci anchored to reference gene; and the last row is the number of total anchored gene loci.

1BS1BL2BS2BL3B4BS4BL5BS5BL6BS6BL7BS7BL
Assembly
Chromosome size (Mbp)3145354225069933914302905804154983605406,274
Sequence (Mbp)212.8299.4292404.5638.6308.2248.7174.5415.2210.2257.4206.1259.63,927.2
Coverage (x-fold)0.680.560.690.800.640.790.580.600.720.510.520.570.480.63
L50 (bp)3,2873,1203,7112,9412,6553,4631,9743,3152,9242,3662,0312,4281,556
Repeat
No. of contigs26,05029,78335,74375,87975,02238,51546,57618,00175,88729,56635,72724,11958,554569,422
L507,4137,1518,0696,8906,8558,7555,8837,3657,5374,9724,8246,4354,144
GenomeZipper
No. of markers78348278428500461451674042172451401983,194
No. of wheat fl-cDNAs782191552684799717066360881471091372,373
No. of nonred. contigs7761,9271,8593,0795,0118931,6345763,2969151,5251,1721,89024,553
No. of syntenic gene loci4851,4851,1811,9733,1237881,1554262,3155651,0037331,05016,282
No. of anchored gene loci5461,7451,3882,2653,4908191,2435652,6007281,1778381,20318,607
POP-Seq Anchoring
No. of contigs31,03850,21933,60354,52299,34150,92741,13519,79449,14030,96238,06448,51450,397597,656
No. of anchored gene loci9561,8811,5882,3893,7721,3651,4337272,8578319961,055125121,101